An Open-source Image Analysis Toolbox for Quantitative Retinal Optical Coherence Tomography Angiography

سال انتشار: 1403
نوع سند: مقاله ژورنالی
زبان: انگلیسی
مشاهده: 108

فایل این مقاله در 12 صفحه با فرمت PDF قابل دریافت می باشد

این مقاله در بخشهای موضوعی زیر دسته بندی شده است:

استخراج به نرم افزارهای پژوهشی:

لینک ثابت به این مقاله:

شناسه ملی سند علمی:

JR_JBPE-14-1_004

تاریخ نمایه سازی: 21 بهمن 1402

چکیده مقاله:

Background: Qualitative and quantitative assessment of retinal perfusion using optical coherence tomography angiography (OCTA) has shown to be effective in the treatment and management of various retinal and optic nerve diseases. However, manual analyses of OCTA images to calculate metrics related to Foveal Avascular Zone (FAZ) morphology, and retinal vascular density and morphology are costly, time-consuming, subject to human error, and are exposed to both inter and intra operator variability. Objective: This study aimed to develop an open-source software framework for quantitative OCTA (QOCTA). Particularly, for analyzing OCTA images and measuring several indices describing microvascular morphology, vessel morphology, and FAZ morphology. Material and Methods: In this analytical study, we developed a toolbox or QOCTA using image processing algorithms provided in MATLAB. The software automatically determines FAZ and measures several parameters related to both size and shape of FAZ including area, perimeter, Feret’s diameter circularity, axial ratio, roundness, and solidity. The microvascular structure is derived from the processed image to estimate the vessel density (VD). To assess the reliability of the software, three independent operators measured the mentioned parameters for the eyes of ۲۱ subjects. The consistency of the values was assessed using the intraclass correlation coefficient (ICC) index. Results: Excellent consistency was observed between the measurements completed for the superficial layer, ICC >۰.۹. For the deep layer, good reliability in the measurements was achieved, ICC >۰.۷.  Conclusion: The developed software is reliable; hence, it can facilitate quantitative OCTA, further statistical comparison in cohort OCTA studies, and can assist with obtaining deeper insights into retinal variations in various populations.

نویسندگان

Yalda Amirmoezzi

Department of Medical Physics and Engineering, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran

Mohsen Ghofrani-Jahromi

Turner Institute for Brain and Mental Health, Monash University, Australia

Hossein Parsaei

Department of Medical Physics and Engineering, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran

Mehrdad Afarid

Poostchi Ophthalmology Research Center, Department of Ophthalmology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran

Negar Mohsenipoor

Poostchi Ophthalmology Research Center, Department of Ophthalmology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran

مراجع و منابع این مقاله:

لیست زیر مراجع و منابع استفاده شده در این مقاله را نمایش می دهد. این مراجع به صورت کاملا ماشینی و بر اساس هوش مصنوعی استخراج شده اند و لذا ممکن است دارای اشکالاتی باشند که به مرور زمان دقت استخراج این محتوا افزایش می یابد. مراجعی که مقالات مربوط به آنها در سیویلیکا نمایه شده و پیدا شده اند، به خود مقاله لینک شده اند :
  • Fercher AF, Drexler W, Hitzenberger CK, Lasser T. Optical coherence ...
  • Ware HOT, Liu W, Hu J, Zhang H, Sun C. ...
  • De Carlo TE, Romano A, Waheed NK, Duker JS. A ...
  • Matsunaga D, Yi J, Puliafito CA, Kashani AH. OCT angiography ...
  • Arend O, Wolf S, Jung F, Bertram B, Pöstgens H, ...
  • Khansari MM, O’Neill W, Lim J, Mahnaz S. Method for ...
  • Jia Y, Bailey ST, Hwang TS, McClintic SM, Gao SS, ...
  • Freiberg FJ, Pfau M, Wons J, Wirth MA, Becker MD, ...
  • Gadde SGK, Anegondi N, Bhanushali D, Chidambara L, Yadav NK, ...
  • Wang Q, Chan S, Yang JY, You B, Wang YX, ...
  • Takase N, Nozaki M, Kato A, Ozeki H, Yoshida M, ...
  • Kim K, In You J, Park JR, Kim ES, Oh ...
  • GitHub [Internet]. Mghofrani/OCTA-Quantitative-Analysis: A MATLAB Framework for Quantitative Analysis of ...
  • Adhi M, Bonini Filho MA, Louzada RN, Kuehlewein L, Talisa ...
  • Tang FY, Ng DS, Lam A, Luk F, Wong R, ...
  • Gonzalez RC, Woods RE. Digital Image Processing (۳rd Edition). USA: ...
  • Shiihara H, Terasaki H, Sonoda S, Kakiuchi N, Shinohara Y, ...
  • Tang W, Guo J, Liu W, Xu G. Quantitative analysis ...
  • Lin G, Wang W, Kang C, Wang C. Multispectral MR ...
  • Kim AY, Chu Z, Shahidzadeh A, Wang RK, Puliafito CA, ...
  • Chan TF, Sandberg BY, Vese LA. Active Contours without Edges ...
  • Koo TK, Li MY. A Guideline of Selecting and Reporting ...
  • Hagag AM, Gao SS, Jia Y, Huang D. Optical coherence ...
  • نمایش کامل مراجع