Unveiling Gastric Cancer Biomarkers: A Synergistic Approach of Bioinformatics and Machine Learning

سال انتشار: 1404
نوع سند: مقاله کنفرانسی
زبان: انگلیسی
مشاهده: 93

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شناسه ملی سند علمی:

AIMS02_496

تاریخ نمایه سازی: 29 تیر 1404

چکیده مقاله:

Background and Aims: Gastric cancer continues to be a leading cause of cancer-related deaths worldwide, highlighting the urgent need for reliable biomarkers and effective treatments. This study aims to identify dysregulated microRNAs in gastric cancer through comprehensive bioinformatics analysis and machine learning approaches, with the hypothesis that specific microRNA signatures can serve as both diagnostic markers and therapeutic targets. Methods: The study analyzed RNA sequencing data from the GEO dataset GSE۱۶۴۱۷۴ using an integrated computational approach. Differential expression analysis was performed to identify significantly altered microRNAs, followed by pathway enrichment analysis to investigate their biological functions. Machine learning models, particularly random forest algorithms, were employed to evaluate the diagnostic potential of the identified microRNA signatures. Results: Analysis revealed ۲,۵۶۵ significantly dysregulated microRNAs in gastric cancer, with hsa-miR-۴۴۸۱ showing notable upregulation and hsa-miR-۵۱۰۰ demonstrating significant downregulation. Pathway analysis identified miRNA-mediated mRNA degradation as a key molecular mechanism involved in gastric tumorigenesis. The random forest models achieved excellent diagnostic performance, with area under the curve values exceeding ۰.۹۰, indicating high predictive accuracy. Conclusion: This study demonstrates the potential of specific microRNA signatures as non-invasive biomarkers for gastric cancer diagnosis and as targets for therapeutic intervention. The integration of bioinformatics and machine learning provides a powerful framework for translating molecular discoveries into clinical applications. Future research should focus on experimental validation of these findings in clinical samples and the development of targeted therapies based on the identified microRNA pathways.

نویسندگان

Omid Ebrahimpour

Faculty of Pharmacy and student research committee, Tabriz University of Medical Sciences, Tabriz, ۵۱۳۶۸, Iran.

Soodabeh Davaran

Faculty of Pharmacy, Department of Medicinal Chemistry and Drug Applied Research Center, Tabriz University of Medical Sciences, Tabriz, ۵۱۳۶۸, Iran.

Mohammad Rastin

Faculty of Pharmacy, Tabriz University of Medical Sciences, Daneshgah Street, Tabriz, Iran

Aisan Salamati

Department of Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran.