Binding Mechanism of Glycosaminoglycans to Glycosylated Interleukin 1 Receptor Type I
محل انتشار: هشتمین همایش بیوانفورماتیک ایران
سال انتشار: 1397
نوع سند: مقاله کنفرانسی
زبان: انگلیسی
مشاهده: 490
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شناسه ملی سند علمی:
IBIS08_012
تاریخ نمایه سازی: 9 مرداد 1398
چکیده مقاله:
Interleukin 1 family of cytokines are the key players in establishing inflammatory and immune responses [1]. Among the 11 known family members, interleukin 1β (IL-1β) is involved in the chronic inflammatory and autoimmune conditions [1, 2]. Thus, inhibition of IL-1β is of great pharmacological importance [3]. IL-1β activates its target cells by binding to the glycosylated IL-1 transmembrane receptor type I (IL-1RI) with high affinity [4]. Previous biochemical studies have suggested that upon the immune responses, IL-1β is retained on the target cells by interacting with the glycosaminoglycans of the extracellular matrix (GAGs) [5]. Herein, molecular dynamics simulations of the glycosylated and unglycosylated IL-1RI have shown that the receptor adopts two conformational states of Extended and Rotated in its dynamical pattern. Furthermore, it was shown that glycosylation plays a crucial role in the binding mechanism of the GAG to IL-1RI by increasing solvent exposure of the positively charged residues in the receptor that facilitates positing of the GAG in its binding site.
کلیدواژه ها:
Interleukin 1β ، Interleukin 1 Receptor Type I ، Glycosaminoglycans ، Glycosylation ، Molecular Dynamics simulation
نویسندگان
مریم عظیم زاده ایرانی
۱تهران-شهرک اکباتان-بیمه سوم-کوچه ۲۴ غربی-پلاک ۵
محمدرضا اجتهادی
۲دانشکده فیزیک - دانشگاه صنعتی شریف