Integration and Reduction of Microarray Gene Expressions Using an Information Theory Approach

سال انتشار: 1389
نوع سند: مقاله ژورنالی
زبان: انگلیسی
مشاهده: 31

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شناسه ملی سند علمی:

JR_IJCCE-29-4_002

تاریخ نمایه سازی: 17 خرداد 1404

چکیده مقاله:

The DNA microarray is an important technique that allows researchers to analyze many gene expression data in parallel. Although the data can be more significant if they come out of separate experiments, one of the most challenging phases in the microarray context is the integration of separate expression level datasets that have gathered through different techniques. In this paper, we present a general novel method for the integration of any collected data whose distributions have been linearly transformed. The new method is based on the information theory concepts. More than that, this article presents a new approach for checking of the linearity between two distributions as a validation technique. The validation technique assists in taking the feature reduction process in effect prior to the integration phase. The time complexity of the proposed algorithm is low and the new presented methods show good functionality. The experimental results are presented at the end of the paper.

نویسندگان

Reza Shamsaee

Faculty of Computer Engineering, Iran University of Science and Technology (IUST), Tehran, I.R. IRAN

Mahmood Fathy

Faculty of Computer Engineering, Iran University of Science and Technology (IUST), Tehran, I.R. IRAN

Ali Masoudi-Nejad

Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, I.R. IRAN

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