Designing Multi‐Epitope Subunit Vaccine Candidate for Zika Virus Utilizing In silico Tools

سال انتشار: 1400
نوع سند: مقاله ژورنالی
زبان: انگلیسی
مشاهده: 50

فایل این مقاله در 10 صفحه با فرمت PDF قابل دریافت می باشد

استخراج به نرم افزارهای پژوهشی:

لینک ثابت به این مقاله:

شناسه ملی سند علمی:

JR_REMJ-10-1_002

تاریخ نمایه سازی: 20 دی 1402

چکیده مقاله:

Background: The arboviruses Zika virus (ZIKV) is a pathogen that threatens human health. Scientists have warned that a single mutation in the mosquito-borne ZIKV could spark another major outbreak of the disease in humans. Therefore, designing a suitable vaccine for this virus seems necessary. This study aimed to predict the protective epitopes of envelope protein from the Zika virus with bioinformatics methods for multi-epitope vaccine development. Materials and Methods: Computational studies including the identification of potential B-cell and T-cell epitopes were used. For generating a multi-epitopic vaccine construct (MEVC), selected epitopes are connected by suitable linkers. To enhance protein immunogenicity, Maltosebound protein was added to the MEVC after the prediction and refinement of the ۳D structure of the designed vaccine. The binding mode of the MEVC with toll-like receptor was investigated by molecular docking technique. Finally, molecular dynamics and in silico cloning were performed for the designed vaccine. Results: This study showed that this recombinant vaccine is nontoxic, nonallergenic, and thermostable and elicits immune responses against the Zika virus. Conclusion: The computational data suggest that the MEVC has appropriate characteristics and a high-quality structure.

نویسندگان

Fatemeh Shams Moattar

Department of microbiology, Faculty of Basic Siences, Lahijan Branch Islamic Azad University, Lahijan, Guilan, Iran.

Azizeh Asadzadeh

Department of biology, faculty of science, Nour Danesh institute of higher education, Meymeh, Isfahan, Iran

Maryam Heydari

Department of biology, faculty of science, Nour Danesh institute of higher education, Meymeh, Isfahan, Iran

Maryam Zamani

Department of biology, faculty of science, Nour Danesh institute of higher education, Meymeh, Isfahan, Iran

Fatemeh Esnaashari

Department of microbiology, Faculty of Basic Siences, Lahijan Branch Islamic Azad University, Lahijan, Guilan, Iran.

Fatemeh Jeldani

Department of microbiology, Faculty of Basic Siences, Lahijan Branch Islamic Azad University, Lahijan, Guilan, Iran.

مراجع و منابع این مقاله:

لیست زیر مراجع و منابع استفاده شده در این مقاله را نمایش می دهد. این مراجع به صورت کاملا ماشینی و بر اساس هوش مصنوعی استخراج شده اند و لذا ممکن است دارای اشکالاتی باشند که به مرور زمان دقت استخراج این محتوا افزایش می یابد. مراجعی که مقالات مربوط به آنها در سیویلیکا نمایه شده و پیدا شده اند، به خود مقاله لینک شده اند :
  • Simpson DI. Zika virus infection in man. Transactions of the ...
  • Kazmi SS, Ali W, Bibi N, Nouroz F. A review ...
  • Boeuf, P., Drummer, H.E., Richards, J.S. et al. The global ...
  • Souza BS, Sampaio GL, Pereira CS, Campos GS, Sardi SI, ...
  • Paul D, Bartenschlager R. Flaviviridae replication organelles: oh, what a ...
  • Tan TY, Fibriansah G, Kostyuchenko VA, Ng TS, Lim XX, ...
  • Hasan SS, Sevvana M, Kuhn RJ, Rossmann MG. Structural biology ...
  • Malekshahi Z, Schiela B, Bernklau S, Banki Z, Würzner R, ...
  • Šebera J, Dubankova A, Sychrovský V, Ruzek D, Boura E, ...
  • Nambala P, Su WC. Role of Zika virus prM protein ...
  • Fontes-Garfias CR, Shan C, Luo H, Muruato AE, Medeiros DB, ...
  • Berneck BS, Rockstroh A, Fertey J, Grunwald T, Ulbert S. ...
  • Sirohi, D., & Kuhn, R. J. (۲۰۱۷). Zika Virus Structure, ...
  • Pongor S, Landsman D. Bioinformatics and the developing world. Biotechnology ...
  • Oli AN, Obialor WO, Ifeanyichukwu MO, Odimegwu DC, Okoyeh JN, ...
  • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the ...
  • Vita R, Mahajan S, Overton JA, Dhanda SK, Martini S, ...
  • Jespersen MC, Peters B, Nielsen M, Marcatili P. BepiPred-۲.۰: improving ...
  • Reche PA, Glutting JP, Zhang H, Reinherz EL. Enhancement to ...
  • Dimitrov I, Flower DR, Doytchinova I. AllerTOPa server for in ...
  • Sharma N, Naorem LD, Jain S, Raghava GP. ToxinPred۲: an ...
  • Doytchinova IA, Flower DR. VaxiJen: a server for prediction of ...
  • Jie J, Zhang Y, Zhou H, Zhai X, Zhang N, ...
  • Sen TZ, Jernigan RL, Garnier J, Kloczkowski A. GOR V ...
  • Kelley LA, Mezulis S, Yates CM, Wass MN, Sternberg MJ. ...
  • Yakob L. Zika Virus after the Public Health Emergency of ...
  • Maharaj L, Adeleke VT, Fatoba AJ, Adeniyi AA, Tshilwane SI, ...
  • Khongwichit S, Sornjai W, Jitobaom K, Greenwood M, Greenwood MP, ...
  • Daus ML, Berendt S, Wuttge S, Schneider E. Maltose binding ...
  • Barh D, Barve N, Gupta K, Chandra S, Jain N, ...
  • Gasteiger E, Hoogland C, Gattiker A, Wilkins MR, Appel RD, ...
  • Ikai A. Thermostability and aliphatic index of globular proteins. The ...
  • Kumar H, Kawai T, Akira S. Toll-like receptors and innate ...
  • Vanwalscappel B, Tada T, Landau NR. Toll-like receptor agonist R۸۴۸ ...
  • Beatty PR, Puerta-Guardo H, Killingbeck SS, Glasner DR, Hopkins K, ...
  • Modhiran N, Watterson D, Muller DA, Panetta AK, Sester DP, ...
  • Nambala P, Su WC. Role of Zika virus prM protein ...
  • Asadzadeh A, Sirous H, Pourfarzam M, Yaghmaei P, Afshin F. ...
  • Naderi Kotaki M, Asadzadeh A, Heidaryan F. study the effect ...
  • Ghaffari S, Asadzadeh A, Seyedhosseini Ghaheh H, Sholehvar F. Docking ...
  • نمایش کامل مراجع