Centrality analysis of protein-protein interaction networks reveals shared genes between type 1 diabetes and multiple sclerosis

سال انتشار: 1398
نوع سند: مقاله کنفرانسی
زبان: انگلیسی
مشاهده: 350

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شناسه ملی سند علمی:

IBIS09_022

تاریخ نمایه سازی: 19 اسفند 1399

چکیده مقاله:

Type 1 diabetes (T1D) and multiple sclerosis (MS) are considered as organ-specific autoimmune diseases in children and young adults [1]. The co-occurrence of T1D and MS has been represented by the number of studies [2]. Despite the reported association of T1D and MS, the identification of common genes remains a challenge. Nowadays, predictive performance of gene expression signatures has been improved by integrating interactome data. Protein–protein interactions (PPI) at the whole genome level, interactome, are an important source to achieve more information about the cellular function [3]. Here, we integrated transcriptome-interactome data to construct PPI networks in T1D and MS. These PPI were undergone comprehensive centrality analysis and common high central genes were identified.

نویسندگان

Nahid Safari Alighiarloo

Endocrine Research Center, Institute of Endocrinology and Metabolism, Iran University of Medical Sciences, Tehran, Iran

Mohammad Taghizadeh

Bioinformatics Department, Institute of Biochemistry and Biophysics, Tehran University, Tehran, Iran

Mostafa Rezaei Tavirani

Proteomics Research Center, Department of Basic Science, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran

Seyyed Mohammad Tabatabaei

Medical Informatics Department, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran

Saeed Namaki

Immunology Department, Faculty of Medical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran